atb - Container outputs

IPRGC

2026/03/18 Analyses of the IPRGC re-processed samples.
2026/03/17 Preprocessing the IPRGC samples de-novo.
2026/03/14 Analyses of the IPRGC re-processed samples.
2026/03/14 Preprocessing the IPRGC samples de-novo.
2026/03/11 Analyses of the IPRGC re-processed samples.
2026/03/11 Preprocessing the IPRGC samples de-novo.
2026/03/10 Analyses of the IPRGC re-processed samples.
2026/03/10 Preprocessing the IPRGC samples de-novo.
2026/03/09 Analyses of the IPRGC re-processed samples.
2026/03/09 Preprocessing the IPRGC samples de-novo.
2026/03/04 Analyses of the IPRGC re-processed samples.
2026/03/04 Preprocessing the IPRGC samples de-novo.
2026/03/04 Preprocessing the IPRGC samples de-novo.
2026/03/03 Analyses of the IPRGC re-processed samples.
2026/03/03 Preprocessing the IPRGC samples de-novo.
2026/02/26 Analyses of the IPRGC re-processed samples.
2026/02/26 Preprocessing the IPRGC samples de-novo.
2026/02/26 Analyses of the IPRGC re-processed samples.
2026/02/26 Preprocessing the IPRGC samples de-novo.
2026/02/25 Analyses of the IPRGC re-processed samples.
2026/02/25 Preprocessing the IPRGC samples de-novo.
2026/02/24 Analyses of the IPRGC re-processed samples.
2026/02/24 Preprocessing the IPRGC samples de-novo.
2025/02/28 Analyses of the IPRGC re-processed samples.

Comparisons Among Clinical Strains

2026/03/16 TMRC2 202603: Data Set Creation
2026/03/06 TMRC2 202603: Data Set Creation
2026/03/06 TMRC3 202308: Creating Data Structures
2026/03/06 atb
2026/03/06 TMRC3 202603: README/Introduction
2026/03/06 TMRC2 202603: Promastigote (mostly) Differential Expression Analyses.
2026/03/04 TMRC3 202308: Creating Data Structures
2026/02/17 TMRC3 202602: README/Introduction
2026/02/17 TMRC2 202602: Promastigote (mostly) Differential Expression Analyses.
2026/02/17 TMRC3 202308: Creating Data Structures
2025/10/18 TMRC3 202510: README/Introduction
2025/10/18 TMRC2 202510: Visualizing Analyses following differential expression
2025/10/18 TMRC2 202510: Promastigote (mostly) Differential Expression Analyses.
2025/10/18 TMRC2 202510: Visualizing Analyses before DE/variant analyses
2025/10/18 TMRC2 202510: Data Set Creation
2025/10/18 TMRC3 202308: Creating Data Structures
2025/10/16 TMRC3 202510: README/Introduction
2025/10/16 TMRC2 202510: Promastigote (mostly) Differential Expression Analyses.
2025/10/16 TMRC2 202510: Visualizing Analyses before DE/variant analyses
2025/10/16 TMRC2 202510: Data Set Creation
2025/10/16 TMRC3 202308: Creating Data Structures
2025/10/16 TMRC3 202510: README/Introduction
2025/10/16 TMRC2 202510: Promastigote (mostly) Differential Expression Analyses.
2025/10/16 TMRC2 202510: Visualizing Analyses before DE/variant analyses
2025/10/16 TMRC2 202510: Data Set Creation
2025/10/16 TMRC3 202308: Creating Data Structures
2025/10/14 TMRC3 202510: README/Introduction
2025/10/14 TMRC2 202510: Promastigote (mostly) Differential Expression Analyses.
2025/10/14 TMRC2 202510: Visualizing Analyses before DE/variant analyses
2025/10/14 TMRC2 202510: Data Set Creation
2025/10/14 TMRC3 202308: Creating Data Structures
2025/10/14 TMRC3 202510: README/Introduction
2025/10/14 TMRC2 202510: Promastigote (mostly) Differential Expression Analyses.
2025/10/14 TMRC2 202510: Visualizing Analyses before DE/variant analyses
2025/10/14 TMRC2 202510: Data Set Creation
2025/10/14 TMRC3 202308: Creating Data Structures
2025/10/13 TMRC3 202510: README/Introduction
2025/10/13 TMRC2 202510: Promastigote (mostly) Differential Expression Analyses.
2025/10/13 TMRC2 202510: Visualizing Analyses before DE/variant analyses
2025/10/13 TMRC2 202510: Data Set Creation
2025/10/13 TMRC3 202308: Creating Data Structures
2025/10/13 TMRC3 202510: README/Introduction
2025/10/13 TMRC2 202510: Promastigote (mostly) Differential Expression Analyses.
2025/10/13 TMRC2 202510: Visualizing Analyses before DE/variant analyses
2025/10/13 TMRC2 202510: Data Set Creation
2025/10/13 TMRC3 202308: Creating Data Structures
2025/10/13 TMRC3 202510: README/Introduction
2025/10/13 TMRC2 202510: Promastigote (mostly) Differential Expression Analyses.
2025/10/13 TMRC2 202510: Visualizing Analyses before DE/variant analyses
2025/10/13 TMRC2 202510: Data Set Creation
2025/10/13 TMRC3 202308: Creating Data Structures
2025/10/10 TMRC3 202510: README/Introduction
2025/10/10 TMRC2 202510: Promastigote (mostly) Differential Expression Analyses.
2025/10/10 TMRC2 202510: Visualizing Analyses before DE/variant analyses
2025/10/10 TMRC2 202510: Data Set Creation
2025/10/10 TMRC3 202308: Creating Data Structures
2025/10/10 TMRC3 202510: README/Introduction
2025/10/10 TMRC2 202510: Promastigote (mostly) Differential Expression Analyses.
2025/10/10 TMRC2 202510: Visualizing Analyses before DE/variant analyses
2025/10/10 TMRC2 202510: Data Set Creation
2025/10/10 TMRC3 202308: Creating Data Structures
2025/10/09 TMRC3 202510: README/Introduction
2025/10/09 TMRC2 202510: Promastigote (mostly) Differential Expression Analyses.
2025/10/09 TMRC2 202510: Visualizing Analyses before DE/variant analyses
2025/10/09 TMRC2 202510: Data Set Creation
2025/10/09 TMRC3 202308: Creating Data Structures
2025/10/08 TMRC3 202510: README/Introduction
2025/10/08 TMRC2 202510: Promastigote (mostly) Differential Expression Analyses.
2025/10/08 TMRC2 202510: Visualizing Analyses before DE/variant analyses
2025/10/08 TMRC2 202510: Data Set Creation
2025/10/08 TMRC3 202308: Creating Data Structures
2024/09/23 TMRC2 202409: Data Set Creation
2024/06/21 TMRC2 202406: Visualizing Analyses following differential expression
2024/06/21 TMRC2 202406: Promastigote (mostly) Differential Expression Analyses.
2024/06/21 TMRC2 202406: Data Set Creation
2024/06/17 TMRC2 202406: Visualizing Analyses following differential expression
2024/06/17 TMRC2 202406: Promastigote (mostly) Differential Expression Analyses.
2024/06/17 TMRC2 202406: Data Set Creation
2024/06/14 TMRC2 202406: Visualizing Analyses following differential expression
2024/06/14 TMRC2 202406: Promastigote (mostly) Differential Expression Analyses.
2024/06/14 TMRC2 202406: Data Set Creation
2024/06/12 TMRC2 202406: Visualizing Analyses following differential expression
2024/06/12 TMRC2 202406: Promastigote (mostly) Differential Expression Analyses.
2024/06/12 TMRC2 202406: Data Set Creation
2024/06/07 TMRC2 202406: Visualizing Analyses following differential expression
2024/06/07 TMRC2 202406: Promastigote (mostly) Differential Expression Analyses.
2024/06/07 TMRC2 202406: Visualizing Analyses before DE/variant analyses
2024/06/07 TMRC2 202406: Data Set Creation
2024/05/21 TMRC2 202405: Visualizing Analyses following differential expression
2024/05/21 TMRC2 202405: Promastigote (mostly) Differential Expression Analyses.
2024/05/21 TMRC2 202405: Visualizing Analyses before DE/variant analyses
2024/05/21 TMRC2 202405: Visualizing Analyses following differential expression
2024/05/21 TMRC2 202405: Promastigote (mostly) Differential Expression Analyses.
2024/05/21 TMRC2 202405: Data Set Creation
2024/05/21 TMRC2 202405: Data Set Creation
2024/05/18 TMRC2 202405: Visualizing Analyses following differential expression
2024/05/18 TMRC2 202405: Promastigote (mostly) Differential Expression Analyses.
2024/05/18 TMRC2 202405: Visualizing Analyses before DE/variant analyses
2024/05/18 TMRC2 202405: Data Set Creation
2024/05/16 TMRC2 202405: Visualizing Analyses following differential expression
2024/05/16 TMRC2 202405: Promastigote (mostly) Differential Expression Analyses.
2024/05/16 TMRC2 202405: Visualizing Analyses before DE/variant analyses
2024/05/16 TMRC2 202405: Data Set Creation
2024/05/15 TMRC2 202405: Visualizing Analyses following differential expression
2024/05/15 TMRC2 202405: Promastigote (mostly) Differential Expression Analyses.
2024/05/15 TMRC2 202405: Visualizing Analyses before DE/variant analyses
2024/05/15 TMRC2 202405: Data Set Creation
2024/05/11 TMRC2 202405: Visualizing Analyses following differential expression
2024/05/11 TMRC2 202405: Promastigote (mostly) Differential Expression Analyses.
2024/05/11 TMRC2 202405: Visualizing Analyses before DE/variant analyses
2024/05/11 TMRC2 202405: Data Set Creation
2024/05/11 TMRC2 202405: Promastigote (mostly) Differential Expression Analyses.
2024/05/11 TMRC2 202405: Data Set Creation
2024/02/21 TMRC2 202402: Data Set Creation

Macrophage responses to parasite strains and drugs

2025/10/17 TMRC2 202510: Macrophage Differential Expression.
2025/10/16 TMRC2 202510: Visualizing Macrophage samples.
2025/10/16 Macrophage response to different strains 202510: Data Set Creation
2025/10/16 TMRC3 202308: Creating Data Structures
2025/10/09 TMRC2 202510: Macrophage Differential Expression.
2025/10/07 TMRC2 202510: Macrophage Differential Expression.
2025/10/07 TMRC2 202510: Visualizing Macrophage samples.
2025/10/07 Macrophage response to different strains 202510: Data Set Creation
2025/10/07 TMRC3 202308: Creating Data Structures
2025/10/06 TMRC2 202510: Visualizing Macrophage samples.
2025/10/06 Macrophage response to different strains 202510: Data Set Creation
2025/10/06 TMRC3 202308: Creating Data Structures
2025/10/05 TMRC2 202510: Macrophage Differential Expression.
2025/10/04 TMRC2 202510: Visualizing Macrophage samples.
2025/10/04 Macrophage response to different strains 202510: Data Set Creation
2025/10/04 TMRC3 202308: Creating Data Structures
2025/10/03 TMRC2 202510: Visualizing Macrophage samples.
2025/10/03 Macrophage response to different strains 202510: Data Set Creation
2025/10/03 TMRC3 202308: Creating Data Structures
2025/09/28 TMRC2 202509: Visualizing Macrophage samples.
2025/09/28 Macrophage response to different strains 202509: Data Set Creation
2025/09/28 TMRC3 202308: Creating Data Structures
2025/09/27 TMRC2 202509: Macrophage Differential Expression.
2025/09/27 TMRC2 202509: Visualizing Macrophage samples.
2025/09/27 Macrophage response to different strains 202509: Data Set Creation
2025/09/27 TMRC3 202308: Creating Data Structures
2025/09/26 TMRC2 202509: Macrophage Differential Expression.
2025/09/26 TMRC2 202509: Visualizing Macrophage samples.
2025/09/26 Macrophage response to different strains 202509: Data Set Creation
2025/09/26 TMRC3 202308: Creating Data Structures
2025/09/10 TMRC2 202509: Macrophage Differential Expression.
2025/09/10 TMRC2 202509: Visualizing Macrophage samples.
2025/09/10 Macrophage response to different strains 202509: Data Set Creation
2025/09/10 TMRC3 202308: Creating Data Structures
2025/09/09 TMRC2 202509: Macrophage Differential Expression.
2025/09/08 TMRC2 202509: Visualizing Macrophage samples.
2025/09/08 Macrophage response to different strains 202509: Data Set Creation
2025/09/08 TMRC3 202308: Creating Data Structures
2025/09/08 Macrophage response to different strains 202509: Data Set Creation
2025/09/08 TMRC3 202308: Creating Data Structures
2025/09/04 TMRC2 202509: Macrophage Differential Expression.
2025/09/03 TMRC2 202509: Visualizing Macrophage samples.
2025/09/03 Macrophage response to different strains 202509: Data Set Creation
2025/09/03 TMRC3 202308: Creating Data Structures
2025/09/03 TMRC2 202509: Visualizing Macrophage samples.
2025/09/03 Macrophage response to different strains 202509: Data Set Creation
2025/09/03 TMRC3 202308: Creating Data Structures
2025/09/03 TMRC2 202509: Macrophage Differential Expression.
2025/09/02 TMRC2 202509: Visualizing Macrophage samples.
2025/09/02 Macrophage response to different strains 202509: Data Set Creation
2025/09/02 TMRC3 202308: Creating Data Structures
2025/09/02 TMRC2 202509: Macrophage Differential Expression.
2025/09/01 TMRC2 202509: Visualizing Macrophage samples.
2025/09/01 Macrophage response to different strains 202509: Data Set Creation
2025/09/01 TMRC3 202308: Creating Data Structures
2025/09/01 TMRC2 202509: Macrophage Differential Expression.
2025/09/01 TMRC2 202509: Visualizing Macrophage samples.
2025/09/01 Macrophage response to different strains 202509: Data Set Creation
2025/09/01 TMRC3 202308: Creating Data Structures
2025/08/31 TMRC2 202508: Macrophage Differential Expression.
2025/08/31 TMRC2 202508: Visualizing Macrophage samples.
2025/08/31 Macrophage response to different strains 202508: Data Set Creation
2025/08/31 TMRC3 202308: Creating Data Structures
2025/08/31 TMRC2 202508: Macrophage Differential Expression.
2025/08/31 TMRC2 202508: Visualizing Macrophage samples.
2025/08/31 Macrophage response to different strains 202508: Data Set Creation
2025/08/31 TMRC3 202308: Creating Data Structures
2025/08/30 TMRC2 202508: Macrophage Differential Expression.
2025/08/30 TMRC2 202508: Visualizing Macrophage samples.
2025/08/30 Macrophage response to different strains 202508: Data Set Creation
2025/08/30 TMRC3 202308: Creating Data Structures
2025/08/30 TMRC2 202508: Macrophage Differential Expression.
2025/08/30 TMRC2 202508: Visualizing Macrophage samples.
2025/08/30 Macrophage response to different strains 202508: Data Set Creation
2025/08/30 TMRC3 202308: Creating Data Structures
2025/08/30 TMRC3 202308: Creating Data Structures
2025/08/29 TMRC2 202508: Macrophage Differential Expression.
2025/08/29 TMRC2 202508: Visualizing Macrophage samples.
2025/08/29 Macrophage response to different strains 202508: Data Set Creation
2025/08/29 TMRC3 202308: Creating Data Structures
2025/08/29 TMRC2 202508: Macrophage Differential Expression.
2025/08/29 TMRC2 202508: Visualizing Macrophage samples.
2025/08/29 Macrophage response to different strains 202508: Data Set Creation
2025/08/29 TMRC3 202308: Creating Data Structures

TMRC3 host analyses

2025/03/14 TMRC3 202503: README/Introduction
2025/03/14 TMRC3 ML Classification of outcome: 202503
2025/03/14 TMRC3 202503: Exploring WGCNA
2025/03/14 TMRC3 202503: Likelihood Ratio Tests and GSVA
2025/03/14 TMRC3 Enrichment analyses of the DE results: 202503
2025/03/14 TMRC3 202503: Differential Expression analyses, Tumaco only.
2025/03/14 TMRC3 202503: Differential Expression analyses
2025/03/13 TMRC3 202503: Visualizing Analyses
2025/03/13 TMRC3 202503: Creating Data Structures
2025/03/13 TMRC3 202308: Preprocessing
2025/02/14 TMRC3 202502: README/Introduction
2025/02/14 TMRC3 ML Classification of outcome: 202502
2025/02/14 TMRC3 202502: Exploring WGCNA
2025/02/14 TMRC3 202502: Likelihood Ratio Tests and GSVA
2025/02/14 TMRC3 Enrichment analyses of the DE results: 202502
2025/02/14 TMRC3 202502: Differential Expression analyses, Tumaco only.
2025/02/14 TMRC3 202502: Differential Expression analyses
2025/02/13 TMRC3 202502: Visualizing Analyses
2025/02/13 TMRC3 202502: Creating Data Structures
2025/02/13 TMRC3 202308: Preprocessing
2025/02/12 TMRC3 202502: README/Introduction
2025/02/12 TMRC3 ML Classification of outcome: 202502
2025/02/12 TMRC3 202502: Exploring WGCNA
2025/02/12 TMRC3 202502: Likelihood Ratio Tests and GSVA
2025/02/12 TMRC3 Enrichment analyses of the DE results: 202502
2025/02/12 TMRC3 202502: Differential Expression analyses, Tumaco only.
2025/02/12 TMRC3 202502: Differential Expression analyses
2025/02/11 TMRC3 202502: Visualizing Analyses
2025/02/11 TMRC3 202502: Creating Data Structures
2025/02/11 TMRC3 202308: Preprocessing
2025/02/02 TMRC3 202502: README/Introduction
2025/02/02 TMRC3 ML Classification of outcome: 202502
2025/02/02 TMRC3 202502: Exploring WGCNA
2025/02/02 TMRC3 202502: Likelihood Ratio Tests and GSVA
2025/02/02 TMRC3 Enrichment analyses of the DE results: 202502
2025/02/02 TMRC3 202502: Differential Expression analyses, Tumaco only.
2025/02/02 TMRC3 202502: Differential Expression analyses
2025/02/01 TMRC3 202502: Visualizing Analyses
2025/02/01 TMRC3 202502: Creating Data Structures
2025/02/01 TMRC3 202308: Preprocessing
2025/01/27 TMRC3 202501: README/Introduction
2025/01/27 TMRC3 ML Classification of outcome: 202501
2025/01/27 TMRC3 202501: Exploring WGCNA
2025/01/27 TMRC3 202501: Likelihood Ratio Tests and GSVA
2025/01/27 TMRC3 Enrichment analyses of the DE results: 202501
2025/01/27 TMRC3 202501: Differential Expression analyses, Tumaco only.
2025/01/26 TMRC3 202501: Differential Expression analyses
2025/01/26 TMRC3 202501: Visualizing Analyses
2025/01/26 TMRC3 202501: Creating Data Structures
2025/01/26 TMRC3 202308: Preprocessing
2025/01/24 TMRC3 202501: README/Introduction
2025/01/24 TMRC3 ML Classification of outcome: 202501
2025/01/24 TMRC3 202501: Exploring WGCNA
2025/01/24 TMRC3 202501: Likelihood Ratio Tests and GSVA
2025/01/24 TMRC3 Enrichment analyses of the DE results: 202501
2025/01/24 TMRC3 202501: Differential Expression analyses, Tumaco only.
2025/01/24 TMRC3 202501: Differential Expression analyses
2025/01/23 TMRC3 202501: Visualizing Analyses
2025/01/23 TMRC3 202501: Creating Data Structures
2025/01/23 TMRC3 202308: Preprocessing
2025/01/10 TMRC3 202501: README/Introduction
2025/01/10 TMRC3 ML Classification of outcome: 202501
2025/01/10 TMRC3 202501: Exploring WGCNA
2025/01/10 TMRC3 202501: Likelihood Ratio Tests and GSVA
2025/01/10 TMRC3 Enrichment analyses of the DE results: 202501
2025/01/10 TMRC3 202501: Differential Expression analyses, Tumaco only.
2025/01/09 TMRC3 202501: Differential Expression analyses
2025/01/09 TMRC3 202501: Visualizing Analyses
2025/01/09 TMRC3 202501: Creating Data Structures
2025/01/09 TMRC3 202308: Preprocessing
2025/01/08 TMRC3 202501: README/Introduction
2025/01/08 TMRC3 ML Classification of outcome: 202501
2025/01/08 TMRC3 202501: Exploring WGCNA
2025/01/08 TMRC3 202501: Likelihood Ratio Tests and GSVA
2025/01/08 TMRC3 Enrichment analyses of the DE results: 202501
2025/01/08 TMRC3 202501: Differential Expression analyses, Tumaco only.
2025/01/07 TMRC3 202501: Differential Expression analyses
2025/01/07 TMRC3 202501: Visualizing Analyses
2025/01/07 TMRC3 202501: Creating Data Structures
2025/01/07 TMRC3 202308: Preprocessing
2025/01/07 TMRC3 202501: README/Introduction
2025/01/07 TMRC3 ML Classification of outcome: 202501
2025/01/07 TMRC3 202501: Exploring WGCNA
2025/01/07 TMRC3 202501: Likelihood Ratio Tests and GSVA
2025/01/07 TMRC3 Enrichment analyses of the DE results: 202501
2025/01/07 TMRC3 202501: Differential Expression analyses, Tumaco only.
2025/01/06 TMRC3 202501: Differential Expression analyses
2025/01/06 TMRC3 202501: Visualizing Analyses
2025/01/06 TMRC3 202501: Creating Data Structures
2025/01/06 TMRC3 202308: Preprocessing
2025/01/06 TMRC3 202501: README/Introduction
2025/01/06 TMRC3 ML Classification of outcome: 202501
2025/01/06 TMRC3 202501: Exploring WGCNA
2025/01/06 TMRC3 202501: Likelihood Ratio Tests and GSVA
2025/01/06 TMRC3 Enrichment analyses of the DE results: 202501
2025/01/06 TMRC3 202501: Differential Expression analyses, Tumaco only.
2025/01/05 TMRC3 202501: Differential Expression analyses
2025/01/05 TMRC3 202501: Visualizing Analyses
2025/01/05 TMRC3 202501: Creating Data Structures
2025/01/05 TMRC3 202308: Preprocessing
2025/01/05 TMRC3 202501: README/Introduction
2025/01/05 TMRC3 ML Classification of outcome: 202501
2025/01/05 TMRC3 202501: Exploring WGCNA
2025/01/05 TMRC3 202501: Likelihood Ratio Tests and GSVA
2025/01/05 TMRC3 Enrichment analyses of the DE results: 202501
2025/01/05 TMRC3 202501: Differential Expression analyses, Tumaco only.
2025/01/04 TMRC3 202501: Differential Expression analyses
2025/01/04 TMRC3 202501: Visualizing Analyses
2025/01/04 TMRC3 202501: Creating Data Structures
2025/01/04 TMRC3 202308: Preprocessing
2025/01/04 TMRC3 202501: README/Introduction
2025/01/04 TMRC3 ML Classification of outcome: 202501
2025/01/04 TMRC3 202501: Exploring WGCNA
2025/01/04 TMRC3 202501: Likelihood Ratio Tests and GSVA
2025/01/04 TMRC3 Enrichment analyses of the DE results: 202501
2025/01/04 TMRC3 202501: Differential Expression analyses, Tumaco only.
2025/01/03 TMRC3 202501: Differential Expression analyses
2025/01/03 TMRC3 202501: Visualizing Analyses
2025/01/03 TMRC3 202501: Creating Data Structures
2025/01/03 TMRC3 202308: Preprocessing
2025/01/03 TMRC3 202501: README/Introduction
2025/01/03 TMRC3 ML Classification of outcome: 202501
2025/01/03 TMRC3 202501: Exploring WGCNA
2025/01/03 TMRC3 202501: Likelihood Ratio Tests and GSVA
2025/01/03 TMRC3 Enrichment analyses of the DE results: 202501
2025/01/03 TMRC3 202501: Differential Expression analyses, Tumaco only.
2025/01/02 TMRC3 202501: Differential Expression analyses
2025/01/02 TMRC3 202501: Visualizing Analyses
2025/01/02 TMRC3 202501: Creating Data Structures
2025/01/02 TMRC3 202308: Preprocessing
2025/01/02 TMRC3 202501: README/Introduction
2025/01/02 TMRC3 ML Classification of outcome: 202501
2025/01/02 TMRC3 202501: Exploring WGCNA
2025/01/02 TMRC3 202501: Likelihood Ratio Tests and GSVA
2025/01/02 TMRC3 Enrichment analyses of the DE results: 202501
2025/01/02 TMRC3 202501: Differential Expression analyses, Tumaco only.
2025/01/01 TMRC3 202501: Differential Expression analyses
2025/01/01 TMRC3 202501: Visualizing Analyses
2025/01/01 TMRC3 202501: Creating Data Structures
2025/01/01 TMRC3 202308: Preprocessing
2025/01/01 TMRC3 202412: README/Introduction
2025/01/01 TMRC3 ML Classification of outcome: 202412
2025/01/01 TMRC3 202412: Exploring WGCNA
2025/01/01 TMRC3 202412: Likelihood Ratio Tests and GSVA
2025/01/01 TMRC3 Enrichment analyses of the DE results: 202412
2025/01/01 TMRC3 202412: Differential Expression analyses, Tumaco only.
2024/12/31 TMRC3 202412: Differential Expression analyses
2024/12/31 TMRC3 202412: Visualizing Analyses
2024/12/31 TMRC3 202412: Creating Data Structures
2024/12/31 TMRC3 202308: Preprocessing
2024/12/31 TMRC3 202412: README/Introduction
2024/12/31 TMRC3 ML Classification of outcome: 202412
2024/12/31 TMRC3 202412: Exploring WGCNA
2024/12/31 TMRC3 202412: Likelihood Ratio Tests and GSVA
2024/12/31 TMRC3 Enrichment analyses of the DE results: 202412
2024/12/31 TMRC3 202412: Differential Expression analyses, Tumaco only.
2024/12/30 TMRC3 202412: Differential Expression analyses
2024/12/30 TMRC3 202412: Visualizing Analyses
2024/12/30 TMRC3 202412: Creating Data Structures
2024/12/30 TMRC3 202308: Preprocessing
2024/12/30 TMRC3 202412: README/Introduction
2024/12/30 TMRC3 ML Classification of outcome: 202412
2024/12/30 TMRC3 202412: Exploring WGCNA
2024/12/30 TMRC3 202412: Likelihood Ratio Tests and GSVA
2024/12/30 TMRC3 Enrichment analyses of the DE results: 202412
2024/12/30 TMRC3 202412: Differential Expression analyses, Tumaco only.
2024/12/29 TMRC3 202412: Differential Expression analyses
2024/12/29 TMRC3 202412: Visualizing Analyses
2024/12/29 TMRC3 202412: Creating Data Structures
2024/12/29 TMRC3 202308: Preprocessing
2024/12/29 TMRC3 202412: README/Introduction
2024/12/29 TMRC3 ML Classification of outcome: 202412
2024/12/29 TMRC3 202412: Exploring WGCNA
2024/12/29 TMRC3 202412: Likelihood Ratio Tests and GSVA
2024/12/29 TMRC3 Enrichment analyses of the DE results: 202412
2024/12/29 TMRC3 202412: Differential Expression analyses, Tumaco only.
2024/12/29 TMRC3 202412: Differential Expression analyses
2024/12/28 TMRC3 202412: Visualizing Analyses
2024/12/28 TMRC3 202412: Creating Data Structures
2024/12/28 TMRC3 202308: Preprocessing
2024/12/28 TMRC3 ML Classification of outcome: 202412
2024/12/28 TMRC3 202412: Exploring WGCNA
2024/12/28 TMRC3 202412: Likelihood Ratio Tests and GSVA
2024/12/28 TMRC3 Enrichment analyses of the DE results: 202412
2024/12/27 TMRC3 202412: Differential Expression analyses, Tumaco only.
2024/12/27 TMRC3 202412: Differential Expression analyses
2024/12/27 TMRC3 202412: Visualizing Analyses
2024/12/27 TMRC3 202412: Creating Data Structures
2024/12/27 TMRC3 202308: Preprocessing
2024/12/27 TMRC3 Enrichment analyses of the DE results: 202412
2024/12/27 TMRC3 202412: Differential Expression analyses, Tumaco only.
2024/12/27 TMRC3 202412: Differential Expression analyses
2024/12/27 TMRC3 202412: Visualizing Analyses
2024/12/27 TMRC3 202412: Creating Data Structures
2024/12/26 TMRC3 202308: Preprocessing
2024/12/26 TMRC3 ML Classification of outcome: 202412
2024/12/26 TMRC3 202412: Exploring WGCNA
2024/12/26 TMRC3 202412: Likelihood Ratio Tests and GSVA
2024/12/25 TMRC3 Enrichment analyses of the DE results: 202412
2024/12/25 TMRC3 202412: Differential Expression analyses, Tumaco only.
2024/12/25 TMRC3 202412: Differential Expression analyses
2024/12/25 TMRC3 202412: Visualizing Analyses
2024/12/25 TMRC3 202412: Creating Data Structures
2024/12/25 TMRC3 202308: Preprocessing
2024/12/24 TMRC3 ML Classification of outcome: 202412
2024/12/24 TMRC3 202412: Exploring WGCNA
2024/12/24 TMRC3 202412: Likelihood Ratio Tests and GSVA
2024/12/23 TMRC3 Enrichment analyses of the DE results: 202412
2024/12/23 TMRC3 202412: Differential Expression analyses, Tumaco only.
2024/12/23 TMRC3 202412: Differential Expression analyses
2024/12/23 TMRC3 202412: Visualizing Analyses
2024/12/23 TMRC3 202412: Creating Data Structures
2024/12/23 TMRC3 202308: Preprocessing
2024/12/10 TMRC3 202411: Differential Expression analyses, Tumaco only.
2024/12/04 TMRC3 202411: Differential Expression analyses, Tumaco only.
2024/12/02 TMRC3 202412: Differential Expression analyses
2024/12/02 TMRC3 202412: Visualizing Analyses
2024/12/02 TMRC3 202412: Creating Data Structures
2024/12/02 TMRC3 202308: Preprocessing
2024/11/29 TMRC3 202411: README/Introduction
2024/11/29 TMRC3 ML Classification of outcome: 202411
2024/11/29 TMRC3 202411: Exploring WGCNA
2024/11/29 TMRC3 202411: Likelihood Ratio Tests and GSVA
2024/11/29 TMRC3 Enrichment analyses of the DE results: 202411
2024/11/29 TMRC3 202411: Differential Expression analyses, Tumaco only.
2024/11/28 TMRC3 202411: Differential Expression analyses
2024/11/28 TMRC3 202411: Visualizing Analyses
2024/11/28 TMRC3 202411: Creating Data Structures
2024/11/28 TMRC3 202308: Preprocessing
2024/11/26 TMRC3 202411: README/Introduction
2024/11/26 TMRC3 ML Classification of outcome: 202411
2024/11/26 TMRC3 202411: Exploring WGCNA
2024/11/26 TMRC3 202411: Likelihood Ratio Tests and GSVA
2024/11/26 TMRC3 Enrichment analyses of the DE results: 202411
2024/11/26 TMRC3 202411: Differential Expression analyses, Tumaco only.
2024/11/25 TMRC3 202411: Differential Expression analyses
2024/11/25 TMRC3 202411: Visualizing Analyses
2024/11/25 TMRC3 202411: Creating Data Structures
2024/11/25 TMRC3 202308: Preprocessing
2024/11/22 TMRC3 202411: README/Introduction
2024/11/22 TMRC3 ML Classification of outcome: 202411
2024/11/22 TMRC3 202411: Exploring WGCNA
2024/11/22 TMRC3 202411: Likelihood Ratio Tests and GSVA
2024/11/22 TMRC3 Enrichment analyses of the DE results: 202411
2024/11/22 TMRC3 202411: Differential Expression analyses, Tumaco only.
2024/11/21 TMRC3 202411: Differential Expression analyses
2024/11/21 TMRC3 202411: Visualizing Analyses
2024/11/21 TMRC3 202411: Creating Data Structures
2024/11/21 TMRC3 202308: Preprocessing
2024/11/18 TMRC3 Enrichment analyses of the DE results: 202411
2024/11/18 TMRC3 202411: Creating Data Structures
2024/11/18 TMRC3 202308: Preprocessing
2024/11/15 TMRC3 202411: README/Introduction
2024/11/15 TMRC3 ML Classification of outcome: 202411
2024/11/15 TMRC3 202411: Exploring WGCNA
2024/11/15 TMRC3 202411: Likelihood Ratio Tests and GSVA
2024/11/15 TMRC3 Enrichment analyses of the DE results: 202411
2024/11/15 TMRC3 202411: Differential Expression analyses, Tumaco only.
2024/11/14 TMRC3 202411: Differential Expression analyses
2024/11/14 TMRC3 202411: Visualizing Analyses
2024/11/14 TMRC3 202411: Creating Data Structures
2024/11/14 TMRC3 202308: Preprocessing
2024/11/12 TMRC3 202411: README/Introduction
2024/11/12 TMRC3 ML Classification of outcome: 202411
2024/11/12 TMRC3 202411: Exploring WGCNA
2024/11/12 TMRC3 202411: Likelihood Ratio Tests and GSVA
2024/11/12 TMRC3 Enrichment analyses of the DE results: 202411
2024/11/12 TMRC3 202411: Differential Expression analyses, Tumaco only.
2024/11/11 TMRC3 202411: Differential Expression analyses
2024/11/11 TMRC3 202411: Visualizing Analyses
2024/11/11 TMRC3 202411: Creating Data Structures
2024/11/11 TMRC3 202308: Preprocessing
2024/11/08 TMRC3 202411: README/Introduction
2024/11/08 TMRC3 ML Classification of outcome: 202411
2024/11/08 TMRC3 202411: Exploring WGCNA
2024/11/08 TMRC3 202411: Likelihood Ratio Tests and GSVA
2024/11/08 TMRC3 Enrichment analyses of the DE results: 202411
2024/11/08 TMRC3 202411: Differential Expression analyses, Tumaco only.
2024/11/07 TMRC3 202411: Differential Expression analyses
2024/11/07 TMRC3 202411: Visualizing Analyses
2024/11/07 TMRC3 202411: Creating Data Structures
2024/11/07 TMRC3 202308: Preprocessing
2024/11/05 TMRC3 202411: README/Introduction
2024/11/05 TMRC3 ML Classification of outcome: 202411
2024/11/05 TMRC3 202411: Exploring WGCNA
2024/11/05 TMRC3 202411: Likelihood Ratio Tests and GSVA
2024/11/05 TMRC3 Enrichment analyses of the DE results: 202411
2024/11/05 TMRC3 202411: Differential Expression analyses, Tumaco only.
2024/11/04 TMRC3 202411: Differential Expression analyses
2024/11/04 TMRC3 202411: Visualizing Analyses
2024/11/04 TMRC3 202411: Creating Data Structures
2024/11/04 TMRC3 202308: Preprocessing
2024/11/01 TMRC3 202410: README/Introduction
2024/11/01 TMRC3 ML Classification of outcome: 202410
2024/11/01 TMRC3 202410: Exploring WGCNA
2024/11/01 TMRC3 202410: Likelihood Ratio Tests and GSVA
2024/11/01 TMRC3 Enrichment analyses of the DE results: 202410
2024/11/01 TMRC3 202410: Differential Expression analyses, Tumaco only.
2024/10/31 TMRC3 202410: Differential Expression analyses
2024/10/31 TMRC3 202410: Visualizing Analyses
2024/10/31 TMRC3 202410: Creating Data Structures
2024/10/31 TMRC3 202308: Preprocessing
2024/10/29 TMRC3 202410: README/Introduction
2024/10/29 TMRC3 ML Classification of outcome: 202410
2024/10/29 TMRC3 202410: Exploring WGCNA
2024/10/29 TMRC3 202410: Likelihood Ratio Tests and GSVA
2024/10/29 TMRC3 Enrichment analyses of the DE results: 202410
2024/10/29 TMRC3 202410: Differential Expression analyses, Tumaco only.
2024/10/28 TMRC3 202410: Differential Expression analyses
2024/10/28 TMRC3 202410: Visualizing Analyses
2024/10/28 TMRC3 202410: Creating Data Structures
2024/10/28 TMRC3 202308: Preprocessing
2024/10/24 TMRC3 202410: Visualizing Analyses
2024/10/24 TMRC3 202410: Creating Data Structures
2024/10/24 TMRC3 202308: Preprocessing
2024/10/22 TMRC3 202410: README/Introduction
2024/10/22 TMRC3 ML Classification of outcome: 202410
2024/10/22 TMRC3 202410: Exploring WGCNA
2024/10/22 TMRC3 202410: Likelihood Ratio Tests and GSVA
2024/10/22 TMRC3 Enrichment analyses of the DE results: 202410
2024/10/22 TMRC3 202410: Differential Expression analyses, Tumaco only.
2024/10/21 TMRC3 202410: Differential Expression analyses
2024/10/21 TMRC3 202410: Visualizing Analyses
2024/10/21 TMRC3 202410: Creating Data Structures
2024/10/21 TMRC3 202308: Preprocessing
2024/10/18 TMRC3 202410: README/Introduction
2024/10/18 TMRC3 ML Classification of outcome: 202410
2024/10/18 TMRC3 202410: Exploring WGCNA
2024/10/18 TMRC3 202410: Likelihood Ratio Tests and GSVA
2024/10/18 TMRC3 Enrichment analyses of the DE results: 202410
2024/10/18 TMRC3 202410: Differential Expression analyses, Tumaco only.
2024/10/17 TMRC3 202410: Differential Expression analyses
2024/10/17 TMRC3 202410: Visualizing Analyses
2024/10/17 TMRC3 202410: Creating Data Structures
2024/10/17 TMRC3 202308: Preprocessing
2024/10/15 TMRC3 202410: README/Introduction
2024/10/15 TMRC3 ML Classification of outcome: 202410
2024/10/15 TMRC3 202410: Exploring WGCNA
2024/10/15 TMRC3 202410: Likelihood Ratio Tests and GSVA
2024/10/15 TMRC3 Enrichment analyses of the DE results: 202410
2024/10/15 TMRC3 202410: Differential Expression analyses, Tumaco only.
2024/10/14 TMRC3 202410: Differential Expression analyses
2024/10/14 TMRC3 202410: Visualizing Analyses
2024/10/14 TMRC3 202410: Creating Data Structures
2024/10/14 TMRC3 202308: Preprocessing
2024/10/11 TMRC3 202410: README/Introduction
2024/10/11 TMRC3 ML Classification of outcome: 202410
2024/10/11 TMRC3 202410: Exploring WGCNA
2024/10/11 TMRC3 202410: Likelihood Ratio Tests and GSVA
2024/10/11 TMRC3 Enrichment analyses of the DE results: 202410
2024/10/11 TMRC3 202410: Differential Expression analyses, Tumaco only.
2024/10/11 TMRC3 202410: Differential Expression analyses
2024/10/10 TMRC3 202410: Visualizing Analyses
2024/10/10 TMRC3 202410: Creating Data Structures
2024/10/10 TMRC3 202308: Preprocessing
2024/10/10 TMRC3 202410: README/Introduction
2024/10/10 TMRC3 ML Classification of outcome: 202410
2024/10/10 TMRC3 202410: Exploring WGCNA
2024/10/10 TMRC3 202410: Likelihood Ratio Tests and GSVA
2024/10/10 TMRC3 Enrichment analyses of the DE results: 202410
2024/10/10 TMRC3 202410: Differential Expression analyses, Tumaco only.
2024/10/09 TMRC3 202410: Differential Expression analyses
2024/10/09 TMRC3 202410: Visualizing Analyses
2024/10/09 TMRC3 202410: Creating Data Structures
2024/10/09 TMRC3 202308: Preprocessing
2024/10/08 TMRC3 202410: README/Introduction
2024/10/08 TMRC3 ML Classification of outcome: 202410
2024/10/08 TMRC3 202410: Exploring WGCNA
2024/10/08 TMRC3 202410: Likelihood Ratio Tests and GSVA
2024/10/08 TMRC3 Enrichment analyses of the DE results: 202410
2024/10/08 TMRC3 202410: Differential Expression analyses, Tumaco only.
2024/10/07 TMRC3 202410: Differential Expression analyses
2024/10/07 TMRC3 202410: Visualizing Analyses
2024/10/07 TMRC3 202410: Creating Data Structures
2024/10/07 TMRC3 202308: Preprocessing
2024/10/04 TMRC3 202410: README/Introduction
2024/10/04 TMRC3 ML Classification of outcome: 202410
2024/10/04 TMRC3 202410: Exploring WGCNA
2024/10/04 TMRC3 202410: Likelihood Ratio Tests and GSVA
2024/10/04 TMRC3 Enrichment analyses of the DE results: 202410
2024/10/04 TMRC3 202410: Differential Expression analyses, Tumaco only.
2024/10/03 TMRC3 202410: Differential Expression analyses
2024/10/03 TMRC3 202410: Visualizing Analyses
2024/10/03 TMRC3 202410: Creating Data Structures
2024/10/03 TMRC3 202308: Preprocessing
2024/10/01 TMRC3 202409: README/Introduction
2024/10/01 TMRC3 ML Classification of outcome: 202409
2024/10/01 TMRC3 202409: Exploring WGCNA
2024/10/01 TMRC3 202409: Likelihood Ratio Tests and GSVA
2024/10/01 TMRC3 Enrichment analyses of the DE results: 202409
2024/10/01 TMRC3 202409: Differential Expression analyses, Tumaco only.
2024/09/30 TMRC3 202409: Differential Expression analyses
2024/09/30 TMRC3 202409: Visualizing Analyses
2024/09/30 TMRC3 202409: Creating Data Structures
2024/09/30 TMRC3 202308: Preprocessing
2024/09/27 TMRC3 202409: README/Introduction
2024/09/27 TMRC3 ML Classification of outcome: 202409
2024/09/27 TMRC3 202409: Exploring WGCNA
2024/09/27 TMRC3 202409: Likelihood Ratio Tests and GSVA
2024/09/27 TMRC3 Enrichment analyses of the DE results: 202409
2024/09/27 TMRC3 202409: Differential Expression analyses, Tumaco only.
2024/09/26 TMRC3 202409: Differential Expression analyses
2024/09/26 TMRC3 202409: Visualizing Analyses
2024/09/26 TMRC3 202409: Creating Data Structures
2024/09/26 TMRC3 202308: Preprocessing
2024/09/25 TMRC3 202409: README/Introduction
2024/09/25 TMRC3 ML Classification of outcome: 202409
2024/09/25 TMRC3 202409: Exploring WGCNA
2024/09/25 TMRC3 202409: Likelihood Ratio Tests and GSVA
2024/09/25 TMRC3 Enrichment analyses of the DE results: 202409
2024/09/24 TMRC3 202409: Differential Expression analyses, Tumaco only.
2024/09/24 TMRC3 202409: Differential Expression analyses
2024/09/24 TMRC3 202409: Visualizing Analyses
2024/09/24 TMRC3 202409: Creating Data Structures
2024/09/24 TMRC3 202308: Preprocessing
2024/09/24 TMRC3 ML Classification of outcome: 202409
2024/09/24 TMRC3 202409: Exploring WGCNA
2024/09/24 TMRC3 202409: Likelihood Ratio Tests and GSVA
2024/09/24 TMRC3 Enrichment analyses of the DE results: 202409
2024/09/24 TMRC3 202409: Differential Expression analyses, Tumaco only.
2024/09/23 TMRC3 202409: Differential Expression analyses
2024/09/23 TMRC3 202409: Visualizing Analyses
2024/09/23 TMRC3 202409: Creating Data Structures
2024/09/23 TMRC3 202308: Preprocessing
2024/09/22 TMRC3 ML Classification of outcome: 202409
2024/09/22 TMRC3 202409: Exploring WGCNA
2024/09/22 TMRC3 202409: Likelihood Ratio Tests and GSVA
2024/09/22 TMRC3 Enrichment analyses of the DE results: 202409
2024/09/22 TMRC3 202409: Differential Expression analyses, Tumaco only.
2024/09/22 TMRC3 202409: Differential Expression analyses
2024/09/22 TMRC3 202409: Visualizing Analyses
2024/09/22 TMRC3 202409: Creating Data Structures
2024/09/21 TMRC3 202308: Preprocessing
2024/09/21 TMRC3 ML Classification of outcome: 202409
2024/09/21 TMRC3 202409: Exploring WGCNA
2024/09/21 TMRC3 202409: Likelihood Ratio Tests and GSVA
2024/09/21 TMRC3 Enrichment analyses of the DE results: 202409
2024/09/21 TMRC3 202409: Differential Expression analyses, Tumaco only.
2024/09/21 TMRC3 202409: Differential Expression analyses
2024/09/21 TMRC3 202409: Visualizing Analyses
2024/09/21 TMRC3 202409: Creating Data Structures
2024/09/21 TMRC3 202308: Preprocessing
2024/09/21 TMRC3 ML Classification of outcome: 202409
2024/09/21 TMRC3 202409: Exploring WGCNA
2024/09/21 TMRC3 202409: Likelihood Ratio Tests and GSVA
2024/09/21 TMRC3 Enrichment analyses of the DE results: 202409
2024/09/20 TMRC3 202409: Differential Expression analyses, Tumaco only.
2024/09/20 TMRC3 202409: Likelihood Ratio Tests and GSVA
2024/09/20 TMRC3 Enrichment analyses of the DE results: 202409
2024/09/20 TMRC3 202409: Differential Expression analyses, Tumaco only.
2024/09/20 TMRC3 202409: Differential Expression analyses
2024/09/20 TMRC3 202409: Visualizing Analyses
2024/09/20 TMRC3 202409: Differential Expression analyses
2024/09/20 TMRC3 202409: Creating Data Structures
2024/09/20 TMRC3 202308: Preprocessing
2024/09/20 TMRC3 202409: Visualizing Analyses
2024/09/20 TMRC3 202409: Creating Data Structures
2024/09/20 TMRC3 202308: Preprocessing
2024/09/20 TMRC3 202409: README/Introduction
2024/09/20 TMRC3 ML Classification of outcome: 202409
2024/09/20 TMRC3 202409: Exploring WGCNA
2024/09/20 TMRC3 202409: Likelihood Ratio Tests and GSVA
2024/09/20 TMRC3 Enrichment analyses of the DE results: 202409
2024/09/20 TMRC3 202409: Differential Expression analyses, Tumaco only.
2024/09/19 TMRC3 202409: Differential Expression analyses
2024/09/19 TMRC3 202409: Visualizing Analyses
2024/09/19 TMRC3 202409: Creating Data Structures
2024/09/19 TMRC3 202308: Preprocessing
2024/09/19 TMRC3 ML Classification of outcome: 202409
2024/09/19 TMRC3 202409: Exploring WGCNA
2024/09/19 TMRC3 202409: Likelihood Ratio Tests and GSVA
2024/09/19 TMRC3 Enrichment analyses of the DE results: 202409
2024/09/19 TMRC3 202409: Differential Expression analyses, Tumaco only.
2024/09/18 TMRC3 202409: Differential Expression analyses
2024/09/18 TMRC3 202409: Visualizing Analyses
2024/09/18 TMRC3 202409: Creating Data Structures
2024/09/18 TMRC3 202308: Preprocessing

Fe Adipocyte analyses

2025/01/24 Kim lab analyses 202501: README/Introduction
2025/01/24 Kim Lab: IDD v IAD (Added GSEA)
2024/11/15 Kim lab analyses 202411: README/Introduction
2024/11/15 Kim Lab: IDD v IAD (Added GSEA)
2024/11/12 Kim lab analyses 202411: README/Introduction
2024/11/12 Kim Lab: IDD v IAD (Added GSEA)
2024/11/08 Kim lab analyses 202411: README/Introduction
2024/11/08 Kim Lab: IDD v IAD (Added GSEA)
2024/11/05 Kim lab analyses 202411: README/Introduction
2024/11/05 Kim Lab: IDD v IAD (Added GSEA)
2024/11/01 Kim lab analyses 202411: README/Introduction
2024/11/01 Kim Lab: IDD v IAD (Added GSEA)
2024/10/29 Kim lab analyses 202410: README/Introduction
2024/10/29 Kim Lab: IDD v IAD (Added GSEA)
2024/10/22 Kim lab analyses 202410: README/Introduction
2024/10/22 Kim Lab: IDD v IAD (Added GSEA)
2024/10/18 Kim lab analyses 202410: README/Introduction
2024/10/18 Kim Lab: IDD v IAD (Added GSEA)
2024/10/15 Kim lab analyses 202410: README/Introduction
2024/10/15 Kim Lab: IDD v IAD (Added GSEA)
2024/10/11 Kim lab analyses 202410: README/Introduction
2024/10/11 Kim Lab: IDD v IAD (Added GSEA)
2024/10/10 Kim lab analyses 202410: README/Introduction
2024/10/10 Kim Lab: IDD v IAD (Added GSEA)
2024/10/09 Kim lab analyses 202410: README/Introduction
2024/10/09 Kim Lab: IDD v IAD (Added GSEA)

Cutaneous Biopsies over time with the Wellcome Trust

2024/04/25 An analysis of cutaneous leishmaniasis biopsies: 202404
2024/04/25 TMRC3 202308: Creating Data Structures
2024/04/20 An analysis of cutaneous leishmaniasis biopsies: 202310
2024/04/20 TMRC3 202308: Creating Data Structures